Pseudomonas sp. 21C1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 21C1 is characterized by having a single replicon, which indicates a streamlined genomic structure that can contribute to its adaptability and efficiency in various environments. The genomic sequence of this strain is accessible under the accession number LXJR00000000.1. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, which may include soil, water, and plant surfaces. This versatility often enables them to play significant roles in biogeochemical cycles and in the degradation of pollutants, suggesting an ecological importance in maintaining environmental health and sustainability. The presence of a single replicon in Pseudomonas sp. 21C1 may suggest a level of genomic simplicity that can facilitate rapid growth and adaptation to changing environmental conditions. This adaptability is a hallmark of many Pseudomonas species, which are often employed in bioremediation efforts due to their capacity to degrade various organic compounds. In summary, Pseudomonas sp. 21C1, with its single replicon and genomic accessibility, exemplifies the ecological and biological significance of Pseudomonas species in environmental contexts. Its traits highlight the potential for contributing to ecological balance and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 21C1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 21C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 21C1 contig00110, whole genome shotgun sequence.

Gene Summary

Adenine Count

1041498 bp

Thymine Count

989555 bp

Guanine Count

1611330 bp

Cytosine Count

1699839 bp

Genome Length

5342222 bp

Protein-coding Genes

4603 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine/ornithine succinyltransferase subunit alphaA7D25_05930Not AvailableNegative1300776 - 130179236989.9
bifunctional succinylornithine transaminase/acetylornithine transaminaseA7D25_05935Not AvailableNegative1301934 - 130316943775.5
patatinA7D25_05940Not AvailableNegative1303391 - 130458742060.1
lipid a biosynthesis lauroyl acyltransferaseA7D25_05945Not AvailableNegative1304644 - 130556735273.9
septum site-determining protein mincA7D25_05950Not AvailablePositive1305726 - 130646926110.8
septum site-determining protein mindA7D25_05955Not AvailablePositive1306813 - 130762829610.7
cell division topological specificity factor mineA7D25_05960Not AvailablePositive1307625 - 13078799682.62
rna pseudouridine synthaseA7D25_05965Not AvailablePositive1308030 - 130866523952.6
two-component sensor histidine kinaseA7D25_05970Not AvailableNegative1308794 - 131039859377.7
dna-binding response regulatorA7D25_05975Not AvailableNegative1310463 - 131118526677.3

Displaying genes 1241 – 1250 of 4709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.