Pseudomonas sp. 21C1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 21C1 is characterized by having a single replicon, which indicates a streamlined genomic structure that can contribute to its adaptability and efficiency in various environments. The genomic sequence of this strain is accessible under the accession number LXJR00000000.1. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, which may include soil, water, and plant surfaces. This versatility often enables them to play significant roles in biogeochemical cycles and in the degradation of pollutants, suggesting an ecological importance in maintaining environmental health and sustainability. The presence of a single replicon in Pseudomonas sp. 21C1 may suggest a level of genomic simplicity that can facilitate rapid growth and adaptation to changing environmental conditions. This adaptability is a hallmark of many Pseudomonas species, which are often employed in bioremediation efforts due to their capacity to degrade various organic compounds. In summary, Pseudomonas sp. 21C1, with its single replicon and genomic accessibility, exemplifies the ecological and biological significance of Pseudomonas species in environmental contexts. Its traits highlight the potential for contributing to ecological balance and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 21C1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 21C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 21C1 contig00110, whole genome shotgun sequence.

Gene Summary

Adenine Count

1041498 bp

Thymine Count

989555 bp

Guanine Count

1611330 bp

Cytosine Count

1699839 bp

Genome Length

5342222 bp

Protein-coding Genes

4603 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphonate metabolism protein phnpA7D25_05775Not AvailableNegative1271891 - 127264027099.5
phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnnA7D25_05780Not AvailableNegative1272631 - 127327822923.6
phosphonate metabolism protein phnmA7D25_05785Not AvailableNegative1273278 - 127442341508.4
phosphonate c-p lyase system protein phnlA7D25_05790Not AvailableNegative1274413 - 127513826112.5
phosphonate c-p lyase system protein phnkA7D25_05795Not AvailableNegative1275270 - 127607929661.6
carbon-phosphorus lyaseA7D25_05800Not AvailableNegative1276076 - 127695432913.2
carbon-phosphorus lyase complex subunit phniA7D25_05805Not AvailableNegative1276951 - 127804240016.8
phosphonate c-p lyase system protein phnhA7D25_05810Not AvailableNegative1278042 - 127865322200.3
phosphonate c-p lyase system protein phngA7D25_05815Not AvailableNegative1278653 - 127912917344.6
phosphonate abc transporter, permease protein phneA7D25_05825Not AvailableNegative1279685 - 128047928864.9

Displaying genes 1211 – 1220 of 4709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.