Pseudomonas sp. 1D4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 1D4 is characterized by having a single replicon, which is essential for its genomic organization and cellular function. The genome of this strain is available under the accession number LXJQ00000000.1, indicating its documented genetic sequence in public databases. As a member of the Pseudomonas genus, Pseudomonas sp. 1D4 may exhibit traits typical of this group, including metabolic versatility and the ability to thrive in various environments. Pseudomonas species are known for their capacity to degrade a wide range of organic compounds, which can contribute to bioremediation processes in contaminated environments. The presence of a single replicon suggests that Pseudomonas sp. 1D4 may have streamlined its genetic architecture, potentially enhancing its adaptability to specific ecological niches. This adaptability is crucial for survival in fluctuating environments, allowing the bacterium to respond effectively to changes in nutrient availability and stress conditions. Overall, the traits of Pseudomonas sp. 1D4 underscore its potential ecological role, particularly in nutrient cycling and environmental cleanup, reflecting the broader capabilities of the Pseudomonas genus in diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 1D4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 1D4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 1D4


Gene Summary

Adenine Count

1003855 bp

Thymine Count

967416 bp

Guanine Count

1903315 bp

Cytosine Count

1974545 bp

Genome Length

5849131 bp

Protein-coding Genes

5205 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mechanosensitive ion channel protein mscsA7D27_01610Not AvailableNegative340035 - 34085929646.5
yajq family cyclic di-gmp-binding proteinA7D27_01615Not AvailableNegative340963 - 34144218137.1
diguanylate cyclaseA7D27_01620Not AvailablePositive341667 - 34262935628.0
2-dehydropantoate 2-reductaseA7D27_01625Not AvailablePositive342626 - 34353732569.9
pas domain-containing sensor histidine kinaseA7D27_01630Not AvailablePositive343587 - 34559974632.2
atp:cob(i)alamin adenosyltransferaseA7D27_01635Not AvailablePositive345601 - 34617621043.2
hypothetical proteinA7D27_01640Not AvailableNegative346522 - 34746934699.4
glutathione s-transferaseA7D27_01645Not AvailableNegative347466 - 34810723949.6
bifunctional ornithine acetyltransferase/n-acetylglutamate synthaseA7D27_01650Not AvailableNegative348219 - 34943642156.8
preprotein translocase subunit secaA7D27_01655Not AvailableNegative349554 - 352295103293.0

Displaying genes 371 – 380 of 5207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.