Bradyrhizobium elkanii strain BLY3-8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium elkanii strain BLY3-8 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This strain has been documented to have a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in environmental adaptation. BLY3-8 is notably associated with specific hosts, including Glycine max, commonly known as soybean, and Acacia confusa. These host plants are significant in agricultural and ecological contexts, as they play crucial roles in nitrogen fixation, which enhances soil fertility and supports plant growth. The habitat of Bradyrhizobium elkanii strain BLY3-8 is notably brown seeds. This association suggests a specialized ecological niche that may influence its symbiotic relationships with the host plants. The interaction between BLY3-8 and its hosts can lead to improved nutrient availability in the soil, benefiting not only the host plants but also surrounding flora and fauna. In summary, Bradyrhizobium elkanii strain BLY3-8 exemplifies the intricate relationships between soil bacteria and plants, highlighting its potential role in sustainable agriculture and ecosystem health. This strain's adaptation to specific hosts and its motility may enhance its effectiveness in forming beneficial symbioses, ultimately fostering biodiversity and soil nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium elkanii
Strainstrain BLY3-8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bradyrhizobium elkanii strain BLY3-8
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbrown seeds
Biotic relationshipNot Available
Host(s)Glycine max, Acacia confusa, Avena strigosa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium elkanii strain BLY3-8

Gene Summary

Adenine Count

1670437 bp

Thymine Count

1658950 bp

Guanine Count

2927415 bp

Cytosine Count

2941982 bp

Genome Length

9198916 bp

Protein-coding Genes

8036 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseA6X20_07465Not AvailablePositive8169443 - 817046537534.5
hypothetical proteinA6X20_07470Not AvailableNegative8170482 - 817110523205.7
xanthine phosphoribosyltransferaseA6X20_07475Not AvailableNegative8171283 - 817181019214.0
molybdenum cofactor biosynthesis proteinA6X20_07480Not AvailableNegative8171817 - 817256927013.5
hypothetical proteinA6X20_07485Not AvailablePositive8172795 - 817421352748.3
a alpha-helical domain with a conserved er motiA6X20_07490Not AvailablePositive8174389 - 817533336196.7
transglutaminaseA6X20_07495Not AvailablePositive8175492 - 817633730258.5
alkylhydroperoxidaseA6X20_07500Not AvailablePositive8176525 - 817695015479.5
branched-chain alpha-keto acid dehydrogenase subunit e2A6X20_07505Not AvailableNegative8176981 - 817807838630.3
2-oxoisovalerate dehydrogenaseA6X20_07510Not AvailableNegative8178099 - 817907935239.9

Displaying genes 7181 – 7190 of 8036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.