Amycolatopsis sp. M39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. M39 is a bacterial strain characterized by the presence of flagella, which allows for motility. This trait can be significant in various ecological contexts, as flagellated bacteria often engage in more dynamic interactions within their environments, potentially influencing nutrient cycling or competitive behaviors against other microorganisms. Genomic analysis reveals that Amycolatopsis sp. M39 contains a single replicon, indicating a streamlined genetic structure that may contribute to efficient replication and resource utilization. The strain is cataloged under the accession number LWSF00000000.1, which provides a reference point for researchers interested in its genetic and functional characteristics. In summary, the presence of flagella and a single replicon in Amycolatopsis sp. M39 suggests adaptations that may enhance its survival and ecological roles in various environments. These traits could facilitate motility in response to environmental stimuli, influencing interactions with other microorganisms and their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. M39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. M39 A4R44_contig000063, whole genome shotgun

Gene Summary

Adenine Count

1495050 bp

Thymine Count

1508763 bp

Guanine Count

3470809 bp

Cytosine Count

3431219 bp

Genome Length

9909969 bp

Protein-coding Genes

9288 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative amino acid permease yhdgA4R44_09221Not AvailablePositive9699000 - 970043049914.6
nadp-dependent fatty aldehyde dehydrogenaseA4R44_09222Not AvailablePositive9700427 - 970182748563.4
phthiocerol synthesis polyketide synthase type i ppscA4R44_09223Not AvailableNegative9702668 - 970363032903.5
hth-type transcriptional repressor nicrA4R44_09224Not AvailablePositive9703741 - 970418715926.3
hypothetical proteinA4R44_09225Not AvailableNegative9705270 - 97055188428.13
hth-type transcriptional regulator gltrA4R44_09226Not AvailableNegative9705675 - 970657132004.4
putative abc transporter arginine-binding protein 2 precursorA4R44_09227Not AvailablePositive9706732 - 970766732448.9
l-cystine transport system permease protein tcybA4R44_09228Not AvailablePositive9707654 - 970857433491.4
octopine permease atp-binding protein pA4R44_09229Not AvailablePositive9708567 - 970933727805.8
cystathionine beta-lyase patbA4R44_09230Not AvailablePositive9709337 - 971052142525.2

Displaying genes 9131 – 9140 of 9288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.