Amycolatopsis sp. M39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. M39 is a bacterial strain characterized by the presence of flagella, which allows for motility. This trait can be significant in various ecological contexts, as flagellated bacteria often engage in more dynamic interactions within their environments, potentially influencing nutrient cycling or competitive behaviors against other microorganisms. Genomic analysis reveals that Amycolatopsis sp. M39 contains a single replicon, indicating a streamlined genetic structure that may contribute to efficient replication and resource utilization. The strain is cataloged under the accession number LWSF00000000.1, which provides a reference point for researchers interested in its genetic and functional characteristics. In summary, the presence of flagella and a single replicon in Amycolatopsis sp. M39 suggests adaptations that may enhance its survival and ecological roles in various environments. These traits could facilitate motility in response to environmental stimuli, influencing interactions with other microorganisms and their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. M39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. M39 A4R44_contig000063, whole genome shotgun

Gene Summary

Adenine Count

1495050 bp

Thymine Count

1508763 bp

Guanine Count

3470809 bp

Cytosine Count

3431219 bp

Genome Length

9909969 bp

Protein-coding Genes

9288 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative acetyltransferaseA4R44_05684Not AvailablePositive5927730 - 592826919367.4
xylose isomerase-like tim barrelA4R44_05685Not AvailablePositive5928362 - 592909325135.7
putative oxidoreductase ycjsA4R44_05686Not AvailablePositive5929090 - 593017837246.8
a-factor receptor proteinA4R44_05687Not AvailableNegative5930484 - 593108021680.9
inner membrane protein ybjjA4R44_05688Not AvailablePositive5931182 - 593224936275.8
hypothetical proteinA4R44_05689Not AvailableNegative5932328 - 593278315188.3
sensor histidine kinase mtrbA4R44_05690Not AvailableNegative5932780 - 593418950442.5
transcriptional regulatory protein afsq1A4R44_05691Not AvailableNegative5934186 - 593487825037.2
d-alanyl-d-alanine carboxypeptidaseA4R44_05692Not AvailablePositive5935079 - 593563020633.6
rna polymerase sigma factorA4R44_05693Not AvailableNegative5935627 - 593678441632.1

Displaying genes 5631 – 5640 of 9288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.