Amycolatopsis sp. M39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. M39 is a bacterial strain characterized by the presence of flagella, which allows for motility. This trait can be significant in various ecological contexts, as flagellated bacteria often engage in more dynamic interactions within their environments, potentially influencing nutrient cycling or competitive behaviors against other microorganisms. Genomic analysis reveals that Amycolatopsis sp. M39 contains a single replicon, indicating a streamlined genetic structure that may contribute to efficient replication and resource utilization. The strain is cataloged under the accession number LWSF00000000.1, which provides a reference point for researchers interested in its genetic and functional characteristics. In summary, the presence of flagella and a single replicon in Amycolatopsis sp. M39 suggests adaptations that may enhance its survival and ecological roles in various environments. These traits could facilitate motility in response to environmental stimuli, influencing interactions with other microorganisms and their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. M39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. M39 A4R44_contig000063, whole genome shotgun

Gene Summary

Adenine Count

1495050 bp

Thymine Count

1508763 bp

Guanine Count

3470809 bp

Cytosine Count

3431219 bp

Genome Length

9909969 bp

Protein-coding Genes

9288 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hth-type transcriptional regulator gltcA4R44_05303Not AvailableNegative5521473 - 552236931819.7
inner membrane transport protein ynfmA4R44_05304Not AvailablePositive5522433 - 552362340200.2
putative o-methyltransferaseA4R44_05305Not AvailableNegative5523656 - 552431222719.5
ecf rna polymerase sigma factor sigeA4R44_05306Not AvailablePositive5524547 - 552516123067.1
anti-sigma-e factor rseaA4R44_05307Not AvailablePositive5525158 - 552583222118.1
hypothetical proteinA4R44_05308Not AvailablePositive5526234 - 552681219822.4
periplasmic ph-dependent serine endoprotease degq precursorA4R44_05309Not AvailablePositive5526809 - 552777431779.6
sec-independent protein translocase protein tatbA4R44_05310Not AvailablePositive5527872 - 552830015408.3
hypothetical proteinA4R44_05311Not AvailablePositive5528422 - 552892816737.5
flagellum site-determining protein ylxhA4R44_05312Not AvailableNegative5528985 - 553013039992.6

Displaying genes 5251 – 5260 of 9288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.