Amycolatopsis sp. M39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. M39 is a bacterial strain characterized by the presence of flagella, which allows for motility. This trait can be significant in various ecological contexts, as flagellated bacteria often engage in more dynamic interactions within their environments, potentially influencing nutrient cycling or competitive behaviors against other microorganisms. Genomic analysis reveals that Amycolatopsis sp. M39 contains a single replicon, indicating a streamlined genetic structure that may contribute to efficient replication and resource utilization. The strain is cataloged under the accession number LWSF00000000.1, which provides a reference point for researchers interested in its genetic and functional characteristics. In summary, the presence of flagella and a single replicon in Amycolatopsis sp. M39 suggests adaptations that may enhance its survival and ecological roles in various environments. These traits could facilitate motility in response to environmental stimuli, influencing interactions with other microorganisms and their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. M39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. M39 A4R44_contig000063, whole genome shotgun

Gene Summary

Adenine Count

1495050 bp

Thymine Count

1508763 bp

Guanine Count

3470809 bp

Cytosine Count

3431219 bp

Genome Length

9909969 bp

Protein-coding Genes

9288 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-allose transport system permease protein alscA4R44_04433Not AvailablePositive4593372 - 459441536025.6
d-ribose-binding periplasmic protein precursorA4R44_04434Not AvailablePositive4594447 - 459544834226.6
sensor histidine kinase ypdaA4R44_04435Not AvailablePositive4595548 - 459659737426.7
transcriptional regulatory protein ypdbA4R44_04436Not AvailablePositive4596594 - 459734927172.7
hypothetical proteinA4R44_04437Not AvailablePositive4597501 - 459785113438.8
vacuole effluxer atg22 like proteinA4R44_04438Not AvailablePositive4598045 - 459944550072.2
thymidine kinaseA4R44_04439Not AvailablePositive4599468 - 460022927647.7
rna polymerase-binding protein rbpaA4R44_04440Not AvailablePositive4600456 - 460080313323.7
inner membrane transport protein ynfmA4R44_04441Not AvailableNegative4600902 - 460206539406.6
putative hth-type transcriptional regulator yybrA4R44_04442Not AvailablePositive4602154 - 460259115917.9

Displaying genes 4391 – 4400 of 9288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.