Amycolatopsis sp. M39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. M39 is a bacterial strain characterized by the presence of flagella, which allows for motility. This trait can be significant in various ecological contexts, as flagellated bacteria often engage in more dynamic interactions within their environments, potentially influencing nutrient cycling or competitive behaviors against other microorganisms. Genomic analysis reveals that Amycolatopsis sp. M39 contains a single replicon, indicating a streamlined genetic structure that may contribute to efficient replication and resource utilization. The strain is cataloged under the accession number LWSF00000000.1, which provides a reference point for researchers interested in its genetic and functional characteristics. In summary, the presence of flagella and a single replicon in Amycolatopsis sp. M39 suggests adaptations that may enhance its survival and ecological roles in various environments. These traits could facilitate motility in response to environmental stimuli, influencing interactions with other microorganisms and their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. M39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. M39 A4R44_contig000063, whole genome shotgun

Gene Summary

Adenine Count

1495050 bp

Thymine Count

1508763 bp

Guanine Count

3470809 bp

Cytosine Count

3431219 bp

Genome Length

9909969 bp

Protein-coding Genes

9288 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
riboflavin biosynthesis protein ribbaA4R44_03916Not AvailablePositive4027501 - 402828327063.3
linear gramicidin synthase subunit dA4R44_03917Not AvailablePositive4028862 - 403078468014.1
multifunctional cyclase-dehydratase-3-o-methyl transferase tcmnA4R44_03918Not AvailablePositive4031529 - 403209220631.8
3-oxoacyl-[acyl-carrier-protein] reductase fabgA4R44_03919Not AvailablePositive4032121 - 403297830417.4
pyridoxamine 5'-phosphate oxidaseA4R44_03920Not AvailableNegative4033945 - 403442417335.8
hypothetical proteinA4R44_03921Not AvailableNegative4034949 - 40350804698.39
pheromone autoinducer 2 transporterA4R44_03922Not AvailableNegative4035349 - 403647037908.8
putative transcriptional regulatory protein pdtarA4R44_03924Not AvailablePositive4037830 - 403844122158.8
leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursorA4R44_03925Not AvailablePositive4039041 - 404024641251.5
high-affinity branched-chain amino acid transport system permease protein livhA4R44_03926Not AvailablePositive4040335 - 404076315654.6

Displaying genes 3881 – 3890 of 9288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.