Amycolatopsis sp. M39

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. M39 is a bacterial strain characterized by the presence of flagella, which allows for motility. This trait can be significant in various ecological contexts, as flagellated bacteria often engage in more dynamic interactions within their environments, potentially influencing nutrient cycling or competitive behaviors against other microorganisms. Genomic analysis reveals that Amycolatopsis sp. M39 contains a single replicon, indicating a streamlined genetic structure that may contribute to efficient replication and resource utilization. The strain is cataloged under the accession number LWSF00000000.1, which provides a reference point for researchers interested in its genetic and functional characteristics. In summary, the presence of flagella and a single replicon in Amycolatopsis sp. M39 suggests adaptations that may enhance its survival and ecological roles in various environments. These traits could facilitate motility in response to environmental stimuli, influencing interactions with other microorganisms and their habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. M39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. M39 A4R44_contig000063, whole genome shotgun

Gene Summary

Adenine Count

1495050 bp

Thymine Count

1508763 bp

Guanine Count

3470809 bp

Cytosine Count

3431219 bp

Genome Length

9909969 bp

Protein-coding Genes

9288 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdenum cofactor biosynthesis protein fA4R44_03293Not AvailableNegative3388327 - 338909428363.0
transcriptional activator nphrA4R44_03294Not AvailableNegative3389484 - 339043134999.0
manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenaseA4R44_03295Not AvailableNegative3390535 - 339158739665.4
2-aminomuconic 6-semialdehyde dehydrogenaseA4R44_03296Not AvailableNegative3391584 - 339309254329.2
4-hydroxy-tetrahydrodipicolinate synthaseA4R44_03297Not AvailableNegative3393095 - 339403934121.8
colanic acid/biofilm transcriptional regulatorA4R44_03298Not AvailableNegative3394055 - 339472925306.1
homoprotocatechuate catabolism bifunctional isomerase/decarboxylaseA4R44_03299Not AvailableNegative3394717 - 339616251128.1
peptidase family s58A4R44_03300Not AvailableNegative3396645 - 339771836899.6
hth-type transcriptional repressor kstr2A4R44_03301Not AvailableNegative3397715 - 339832622092.5
putrescine importer puupA4R44_03302Not AvailablePositive3398490 - 339988447478.2

Displaying genes 3261 – 3270 of 9288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.