Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. M39 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1495050 bp
Thymine Count
1508763 bp
Guanine Count
3470809 bp
Cytosine Count
3431219 bp
Genome Length
9909969 bp
Protein-coding Genes
9288 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosynthesis protein f | A4R44_03293 | Not Available | Negative | 3388327 - 3389094 | 28363.0 |
| transcriptional activator nphr | A4R44_03294 | Not Available | Negative | 3389484 - 3390431 | 34999.0 |
| manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase | A4R44_03295 | Not Available | Negative | 3390535 - 3391587 | 39665.4 |
| 2-aminomuconic 6-semialdehyde dehydrogenase | A4R44_03296 | Not Available | Negative | 3391584 - 3393092 | 54329.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | A4R44_03297 | Not Available | Negative | 3393095 - 3394039 | 34121.8 |
| colanic acid/biofilm transcriptional regulator | A4R44_03298 | Not Available | Negative | 3394055 - 3394729 | 25306.1 |
| homoprotocatechuate catabolism bifunctional isomerase/decarboxylase | A4R44_03299 | Not Available | Negative | 3394717 - 3396162 | 51128.1 |
| peptidase family s58 | A4R44_03300 | Not Available | Negative | 3396645 - 3397718 | 36899.6 |
| hth-type transcriptional repressor kstr2 | A4R44_03301 | Not Available | Negative | 3397715 - 3398326 | 22092.5 |
| putrescine importer puup | A4R44_03302 | Not Available | Positive | 3398490 - 3399884 | 47478.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
