Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. M39 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1495050 bp
Thymine Count
1508763 bp
Guanine Count
3470809 bp
Cytosine Count
3431219 bp
Genome Length
9909969 bp
Protein-coding Genes
9288 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | A4R44_02615 | Not Available | Negative | 2668115 - 2670025 | 67738.9 |
| betaine aldehyde dehydrogenase | A4R44_02616 | Not Available | Positive | 2670240 - 2671709 | 52473.6 |
| putrescine importer puup | A4R44_02617 | Not Available | Positive | 2671750 - 2673276 | 54493.0 |
| choline oxidase | A4R44_02618 | Not Available | Positive | 2673273 - 2674826 | 56447.5 |
| putative rna methyltransferase | A4R44_02619 | Not Available | Negative | 2675648 - 2676838 | 42615.5 |
| hypothetical protein | A4R44_02620 | Not Available | Negative | 2676835 - 2679018 | 78939.9 |
| trk system potassium uptake protein trka | A4R44_02621 | Not Available | Positive | 2679043 - 2679708 | 23754.2 |
| trk system potassium uptake protein trka | A4R44_02622 | Not Available | Positive | 2679708 - 2680364 | 23342.8 |
| hypothetical protein | A4R44_02623 | Not Available | Negative | 2680419 - 2681165 | 27156.9 |
| hypothetical protein | A4R44_02624 | Not Available | Negative | 2681175 - 2681555 | 13777.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
