Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. M39 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1495050 bp
Thymine Count
1508763 bp
Guanine Count
3470809 bp
Cytosine Count
3431219 bp
Genome Length
9909969 bp
Protein-coding Genes
9288 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A4R44_02505 | Not Available | Negative | 2557077 - 2558576 | 51785.9 |
| 3-dehydroquinate dehydratase | A4R44_02506 | Not Available | Negative | 2559104 - 2559535 | 15414.2 |
| 3-dehydroquinate synthase | A4R44_02507 | Not Available | Negative | 2559532 - 2560647 | 39006.1 |
| shikimate kinase | A4R44_02508 | Not Available | Negative | 2560850 - 2561374 | 18099.6 |
| chorismate synthase | A4R44_02509 | Not Available | Negative | 2561371 - 2562558 | 41710.8 |
| hypothetical protein | A4R44_02510 | Not Available | Negative | 2562608 - 2563471 | 26902.5 |
| hth-type transcriptional activator rhar | A4R44_02511 | Not Available | Negative | 2563906 - 2564850 | 33859.5 |
| pyridoxamine 5'-phosphate oxidase | A4R44_02512 | Not Available | Positive | 2564933 - 2565358 | 15623.6 |
| hypothetical protein | A4R44_02513 | Not Available | Negative | 2565346 - 2565720 | 13218.2 |
| cytochrome b6-f complex iron-sulfur subunit | A4R44_02514 | Not Available | Positive | 2565822 - 2566235 | 13476.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
