Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. M39 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1495050 bp
Thymine Count
1508763 bp
Guanine Count
3470809 bp
Cytosine Count
3431219 bp
Genome Length
9909969 bp
Protein-coding Genes
9288 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secreted effector protein pipb2 | A4R44_02235 | Not Available | Positive | 2281742 - 2282749 | 35771.5 |
| glycogen synthase | A4R44_02236 | Not Available | Positive | 2282746 - 2284053 | 47156.6 |
| hypothetical protein | A4R44_02237 | Not Available | Positive | 2284031 - 2284468 | 16098.6 |
| hypothetical protein | A4R44_02238 | Not Available | Positive | 2284458 - 2285717 | 45364.7 |
| regulatory protein afsr | A4R44_02239 | Not Available | Negative | 2285670 - 2287688 | 74125.2 |
| putative l-lactate dehydrogenase operon regulatory protein | A4R44_02240 | Not Available | Negative | 2287944 - 2288618 | 23851.3 |
| fosmidomycin resistance protein | A4R44_02241 | Not Available | Negative | 2288662 - 2290215 | 51572.4 |
| hypothetical protein | A4R44_02242 | Not Available | Positive | 2290542 - 2293511 | 104570.0 |
| glyoxalase-like domain protein | A4R44_02243 | Not Available | Negative | 2293532 - 2293903 | 13301.7 |
| hypothetical protein | A4R44_02244 | Not Available | Negative | 2293952 - 2294623 | 24883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
