Cyanobacterium sp. IPPAS B-1200

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Cyanobacterium

Description

Cyanobacterium sp. IPPAS B-1200 is a notable microorganism isolated from Lake Balkhash, a saline lake located in Kazakhstan. This cyanobacterium has been characterized by its single replicon structure, indicating a relatively simple genomic organization compared to other more complex organisms. The accession number for this strain is LWHC00000000.1, which allows for its identification and retrieval in genomic databases. The saline habitat of Lake Balkhash presents unique environmental conditions that this cyanobacterium has adapted to, showcasing its potential resilience to high salinity levels. Cyanobacteria are known for their ability to perform photosynthesis, contributing significantly to primary production in aquatic ecosystems. In saline environments, they can play a crucial role in nutrient cycling and maintaining the overall health of the ecosystem. The presence of Cyanobacterium sp. IPPAS B-1200 in Lake Balkhash highlights the adaptability of cyanobacteria to extreme conditions, which is essential for understanding their ecological significance. These organisms can serve as indicators of environmental change, and their study may provide insights into the functioning of saline aquatic ecosystems. Overall, the characteristics of this cyanobacterium emphasize its ecological importance and potential applications in environmental monitoring and biotechnology.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusCyanobacterium
SpeciesCyanobacterium sp. IPPAS B-1200
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatLake Balkhash; saline lake Balkhash
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cyanobacterium sp. IPPAS B-1200

Gene Summary

Adenine Count

1064789 bp

Thymine Count

1058923 bp

Guanine Count

641211 bp

Cytosine Count

645326 bp

Genome Length

3410249 bp

Protein-coding Genes

2934 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-3A5482_09125Not AvailablePositive533689 - 53422520825.1
yggs family pyridoxal phosphate enzymeA5482_09135Not AvailablePositive535695 - 53638125605.1
ld-carboxypeptidaseA5482_09140Not AvailablePositive537299 - 53819832987.8
alanine racemaseA5482_09145Not AvailableNegative538237 - 53937341754.1
rod shape-determining protein rodaA5482_09150Not AvailableNegative539426 - 54068546406.7
sodium:proton antiporterA5482_09155Not AvailableNegative540893 - 54195437631.0
isocitrate dehydrogenase (nadp(+))A5482_09160Not AvailableNegative542130 - 54354552026.3
hypothetical proteinA5482_09165Not AvailablePositive543776 - 54471136081.6
gamma carbonic anhydrase family proteinA5482_09170Not AvailablePositive544716 - 54522818075.9
transporterA5482_09175Not AvailableNegative545376 - 54671947739.4

Displaying genes 471 – 480 of 2980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.