Cyanobacterium sp. IPPAS B-1200

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Geminocystaceae

Genus

Cyanobacterium

Description

Cyanobacterium sp. IPPAS B-1200 is a notable microorganism isolated from Lake Balkhash, a saline lake located in Kazakhstan. This cyanobacterium has been characterized by its single replicon structure, indicating a relatively simple genomic organization compared to other more complex organisms. The accession number for this strain is LWHC00000000.1, which allows for its identification and retrieval in genomic databases. The saline habitat of Lake Balkhash presents unique environmental conditions that this cyanobacterium has adapted to, showcasing its potential resilience to high salinity levels. Cyanobacteria are known for their ability to perform photosynthesis, contributing significantly to primary production in aquatic ecosystems. In saline environments, they can play a crucial role in nutrient cycling and maintaining the overall health of the ecosystem. The presence of Cyanobacterium sp. IPPAS B-1200 in Lake Balkhash highlights the adaptability of cyanobacteria to extreme conditions, which is essential for understanding their ecological significance. These organisms can serve as indicators of environmental change, and their study may provide insights into the functioning of saline aquatic ecosystems. Overall, the characteristics of this cyanobacterium emphasize its ecological importance and potential applications in environmental monitoring and biotechnology.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyGeminocystaceae
GenusCyanobacterium
SpeciesCyanobacterium sp. IPPAS B-1200
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatLake Balkhash; saline lake Balkhash
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cyanobacterium sp. IPPAS B-1200

Gene Summary

Adenine Count

1064789 bp

Thymine Count

1058923 bp

Guanine Count

641211 bp

Cytosine Count

645326 bp

Genome Length

3410249 bp

Protein-coding Genes

2934 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histone deacetylaseA5482_14345Not AvailableNegative2490718 - 249162933751.9
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylaseA5482_14350Not AvailablePositive2491697 - 249246727474.6
hypothetical proteinA5482_14355Not AvailableNegative2492521 - 249281111303.2
trna guanosine(34) transglycosylase tgtA5482_14360Not AvailableNegative2493175 - 249427240597.1
hypothetical proteinA5482_14365Not AvailableNegative2494376 - 249481916557.7
adenosylcobinamide-gdp ribazoletransferaseA5482_14370Not AvailablePositive2495264 - 249602227817.8
carbon dioxide transporterA5482_14375Not AvailableNegative2496086 - 249737850157.4
nad(p)h-quinone oxidoreductase subunit d4A5482_14380Not AvailableNegative2497726 - 249915952036.4
nad(p)h-quinone oxidoreductase subunit fA5482_14385Not AvailableNegative2499290 - 250110165993.8
lysr family transcriptional regulatorA5482_14390Not AvailableNegative2501255 - 250218735152.6

Displaying genes 2181 – 2190 of 2980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.