Erythrobacter sp. HI0063 HI0063_c99

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Erythrobacter

Description

Erythrobacter sp. HI0063 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number LWFF00000000.1, which provides a reference for its genetic information and aids in its identification and study. As a member of the Erythrobacter genus, HI0063 is likely to possess features typical of this group, which is known for its phototrophic capabilities, although specific metabolic traits are not detailed here. The Gram-negative classification indicates that Erythrobacter sp. HI0063 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that influences its interactions with the environment and its susceptibility to antibiotics. The single replicon suggests a streamlined genomic organization, which may contribute to its adaptability in various ecological niches. This trait could potentially allow Erythrobacter sp. HI0063 to thrive in diverse environments, including aquatic systems where it may play a role in nutrient cycling. In summary, Erythrobacter sp. HI0063's Gram-negative nature, rod shape, and genomic characteristics highlight its potential ecological significance, particularly in environments where phototrophic organisms contribute to primary productivity and ecosystem dynamics. Further studies could elucidate its specific ecological roles and interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusErythrobacter
SpeciesErythrobacter sp. HI0063
StrainHI0063_c99

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erythrobacter sp. HI0063 HI0063_c99, whole genome shotgun

Gene Summary

Adenine Count

597103 bp

Thymine Count

598124 bp

Guanine Count

1029532 bp

Cytosine Count

1033375 bp

Genome Length

3258146 bp

Protein-coding Genes

2913 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-(carboxyamino)imidazole ribonucleotide synthaseA3736_01940Not AvailablePositive2238879 - 223993737887.9
diacylglycerol kinaseA3736_01945Not AvailablePositive2239934 - 224043418051.5
bifunctional riboflavin kinase/fmn adenylyltransferaseA3736_01950Not AvailablePositive2240431 - 224135733870.3
isoleucine--trna ligaseA3736_01955Not AvailablePositive2241413 - 2244451114391.0
signal peptidase iiA3736_01960Not AvailablePositive2244448 - 224500820586.2
hypothetical proteinA3736_01965Not AvailablePositive2245005 - 224541513668.1
dna-binding proteinA3736_01970Not AvailableNegative2245674 - 224700246771.4
hypothetical proteinA3736_01975Not AvailablePositive2247193 - 224788823825.3
3'(2'),5'-bisphosphate nucleotidase cysqA3736_01980Not AvailableNegative2247995 - 224878628107.3
succinate--coa ligase subunit betaA3736_01985Not AvailablePositive2248913 - 225011242757.4

Displaying genes 2061 – 2070 of 2979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.