Niastella populi strain CCTCC AB 208238

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Niastella

Description

Niastella populi strain CCTCC AB 208238 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives in mesophilic conditions, with an optimal growth temperature of 29°C. The bacterium possesses a single replicon, indicating a streamlined genomic structure. As a member of the Niastella genus, which is known for its ecological role in various environments, N. populi may contribute to the microbial community dynamics associated with decaying plant matter. The ability to survive and grow in aerobic conditions suggests that this strain could play a role in the decomposition processes, facilitating nutrient cycling within its ecosystem. The genomic data for this strain is accessible under the accession number LWBP00000000.1, which allows for further exploration and understanding of its genetic makeup and potential functions. This information could aid in deciphering its ecological interactions and contributions to its habitat. Overall, the physiological and genetic traits of Niastella populi strain CCTCC AB 208238 highlight its significance in ecological processes, particularly in environments rich in organic material.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusNiastella
SpeciesNiastella populi
Strainstrain CCTCC AB 208238

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niastella populi strain CCTCC AB 208238 contig99, whole genome

Gene Summary

Adenine Count

2347399 bp

Thymine Count

2351464 bp

Guanine Count

1972528 bp

Cytosine Count

1941541 bp

Genome Length

8612932 bp

Protein-coding Genes

6536 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosamine-6-phosphate deaminaseA4R26_28235Not AvailableNegative6852901 - 685480872476.7
beta-n-acetylhexosaminidaseA4R26_28240Not AvailableNegative6855002 - 685657959713.4
x-pro dipeptidyl-peptidaseA4R26_28245Not AvailableNegative6856911 - 685880972218.0
glycosylasparaginaseA4R26_28250Not AvailablePositive6858922 - 685995036672.4
copper homeostasis protein cutcA4R26_28255Not AvailablePositive6860208 - 686092726235.6
hypothetical proteinA4R26_28260Not AvailableNegative6860975 - 686168525796.7
peptidase m61A4R26_28265Not AvailableNegative6861783 - 686363068292.1
pp_05354A4R26_28270Not AvailablePositive6863762 - 6864238Not Available
hypothetical proteinA4R26_28275Not AvailableNegative6864409 - 686476814234.1
rna polymerase subunit sigma-24A4R26_28280Not AvailableNegative6864808 - 686538022535.4

Displaying genes 5211 – 5220 of 6600 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.