Niastella populi strain CCTCC AB 208238

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Niastella

Description

Niastella populi strain CCTCC AB 208238 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives in mesophilic conditions, with an optimal growth temperature of 29°C. The bacterium possesses a single replicon, indicating a streamlined genomic structure. As a member of the Niastella genus, which is known for its ecological role in various environments, N. populi may contribute to the microbial community dynamics associated with decaying plant matter. The ability to survive and grow in aerobic conditions suggests that this strain could play a role in the decomposition processes, facilitating nutrient cycling within its ecosystem. The genomic data for this strain is accessible under the accession number LWBP00000000.1, which allows for further exploration and understanding of its genetic makeup and potential functions. This information could aid in deciphering its ecological interactions and contributions to its habitat. Overall, the physiological and genetic traits of Niastella populi strain CCTCC AB 208238 highlight its significance in ecological processes, particularly in environments rich in organic material.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusNiastella
SpeciesNiastella populi
Strainstrain CCTCC AB 208238

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niastella populi strain CCTCC AB 208238 contig99, whole genome

Gene Summary

Adenine Count

2347399 bp

Thymine Count

2351464 bp

Guanine Count

1972528 bp

Cytosine Count

1941541 bp

Genome Length

8612932 bp

Protein-coding Genes

6536 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucuronyl hydrolaseA4R26_26195Not AvailableNegative5928508 - 593044572499.2
glycoside hydrolaseA4R26_26200Not AvailableNegative5930601 - 593224760738.2
carbohydrate-binding protein susdA4R26_26205Not AvailableNegative5932867 - 593456163412.1
susc/raga family proteinA4R26_26210Not AvailableNegative5934620 - 5937877119951.0
hypothetical proteinA4R26_26215Not AvailableNegative5938025 - 593911940856.7
rna polymerase sigma-70 factorA4R26_26220Not AvailableNegative5939579 - 594016322220.1
glycoside hydrolaseA4R26_26225Not AvailableNegative5940278 - 594188259299.5
pectin acetylesteraseA4R26_26230Not AvailableNegative5942112 - 594302633664.7
hypothetical proteinA4R26_26235Not AvailableNegative5943129 - 5949386218991.0
gntr family transcriptional regulatorA4R26_26240Not AvailableNegative5949733 - 595046727938.4

Displaying genes 4531 – 4540 of 6600 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.