Pontibacter flavimaris strain S10-8

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter flavimaris strain S10-8 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for possessing a single replicon, indicating a streamlined genetic organization that may be advantageous for its adaptation to specific environments. The genomic data for this strain can be found under the accession LVWA00000000.1, which serves as a reference for researchers studying its genetic and metabolic capabilities. As a member of the Pontibacter genus, which is known to inhabit various aquatic environments, P. flavimaris may play a role in nutrient cycling within its ecological niche. The Gram-negative nature of this bacterium often suggests a complex outer membrane structure, which can influence its interactions with other microbial communities and its resilience to environmental stressors. Understanding the traits of Pontibacter flavimaris strain S10-8 contributes to our knowledge of microbial diversity and the functioning of aquatic ecosystems. Its single replicon may provide insights into the evolutionary adaptations that allow it to thrive in specific habitats, highlighting the intricate relationships between microbial life and their environments. Further research on this strain could elucidate its ecological functions and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter flavimaris
Strainstrain S10-8

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter flavimaris strain S10-8 contig_9, whole genome shotgun

Gene Summary

Adenine Count

1075771 bp

Thymine Count

1071703 bp

Guanine Count

1244514 bp

Cytosine Count

1231803 bp

Genome Length

4623791 bp

Protein-coding Genes

3848 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uracil-dna glycosylaseA3841_12055Not AvailableNegative1152921 - 115358325119.8
co2+/mg2+ efflux protein apagA3841_12060Not AvailablePositive1153675 - 115406114735.7
sam-dependent methyltransferaseA3841_12065Not AvailablePositive1154183 - 115492628746.2
3-deoxy-8-phosphooctulonate synthaseA3841_12070Not AvailableNegative1155018 - 115582729305.5
sam-dependent methyltransferaseA3841_12075Not AvailableNegative1156088 - 115668122681.9
hypothetical proteinA3841_12080Not AvailablePositive1156792 - 115773335962.4
cyanophycin synthetaseA3841_12085Not AvailableNegative1157994 - 116062196224.2
Trna-cysNot AvailableNot AvailablePositive1161004 - 1161074Not Available
macrolide abc transporter permeaseA3841_12095Not AvailableNegative1161455 - 116378285718.4
hypothetical proteinA3841_12100Not AvailableNegative1164189 - 116544548444.9

Displaying genes 961 – 970 of 3897 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.