Rhodanobacter sp. FW510-R10

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. FW510-R10 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism has been identified with a single replicon, which indicates a simpler genomic structure compared to species with multiple replicons. The genomic information for Rhodanobacter sp. FW510-R10 can be accessed through the accession number LVJU00000000.1. Members of the Rhodanobacter genus are typically found in various environmental niches, including soil and aquatic ecosystems, where they may play significant roles in biogeochemical cycling. Their ability to thrive in diverse habitats suggests that they may contribute to nutrient cycling and possibly the degradation of organic matter. Understanding the traits of Rhodanobacter sp. FW510-R10 is crucial for appreciating its potential ecological roles. The single replicon could imply adaptability to specific environmental conditions, which could enhance its survival and functional capabilities in its habitat. Such characteristics may enable Rhodanobacter sp. FW510-R10 to participate in important ecological processes, such as the cycling of sulfur and other nutrients, thereby influencing soil health and ecosystem dynamics. Further research is warranted to determine its specific functions in the ecosystem and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. FW510-R10
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter sp. FW510-R10


Gene Summary

Adenine Count

629786 bp

Thymine Count

628420 bp

Guanine Count

1321631 bp

Cytosine Count

1320966 bp

Genome Length

3900803 bp

Protein-coding Genes

3386 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive140 - 253Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive488 - 3385Not Available
histidine biosynthesis proteinRhoFW510R10_06400P42505Negative1063 - 138612078.5
proline--trna ligaseRhoFW510R10_06405B8GPP4Negative1651 - 334861619.9
hypothetical proteinRhoFW510R10_06410Not AvailableNegative3461 - 387714653.3
16s ribosomal rnaNot AvailableNot AvailablePositive3960 - 5505Not Available
cdp-diacylglycerol--serine o-phosphatidyltransferaseRhoFW510R10_06415Q9ZM68Positive3988 - 477028483.1
hypothetical proteinRhoFW510R10_06420Not AvailablePositive4767 - 524316321.2
ribosomal-protein-alanine n-acetyltransferase rimiRhoFW510R10_06425Q49857Positive5247 - 571717104.8
hypothetical proteinRhoFW510R10_06430Not AvailablePositive5816 - 650226001.8

Displaying genes 1 – 10 of 3441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

242 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 242 metabolites

Health Effects

No health effects information available for this bacterium.