Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | A1395_28455 | Not Available | Negative | 6743748 - 6744758 | 35189.1 |
| aspartate-semialdehyde dehydrogenase | A1395_28460 | Not Available | Negative | 6744936 - 6746048 | 40569.3 |
| 3-isopropylmalate dehydrogenase | A1395_28465 | Not Available | Negative | 6746103 - 6747185 | 38797.7 |
| sam-dependent methyltransferase | A1395_28470 | Not Available | Negative | 6747237 - 6748001 | 28079.1 |
| 3-isopropylmalate dehydratase | A1395_28475 | Not Available | Negative | 6748087 - 6748731 | 24219.6 |
| isopropylmalate isomerase | A1395_28480 | Not Available | Negative | 6748742 - 6750160 | 50584.6 |
| lysr family transcriptional regulator | A1395_28485 | Not Available | Positive | 6750314 - 6751204 | 32525.4 |
| histidine kinase | A1395_28490 | Not Available | Positive | 6751289 - 6754567 | 123355.0 |
| heat-shock protein | A1395_28495 | Not Available | Negative | 6754616 - 6755062 | 16366.3 |
| trna dihydrouridine synthase dusc | A1395_28500 | Not Available | Negative | 6755177 - 6756136 | 35091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







