Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | A1395_19350 | Not Available | Negative | 4711295 - 4711801 | 18201.0 |
| type vi secretion protein | A1395_19355 | Not Available | Negative | 4711866 - 4713359 | 54138.0 |
| type vi secretion protein impa | A1395_19360 | Not Available | Positive | 4713751 - 4714770 | 36323.6 |
| hypothetical protein | A1395_19365 | Not Available | Positive | 4714852 - 4715367 | 18760.6 |
| evpb family type vi secretion protein | A1395_19370 | Not Available | Positive | 4715384 - 4716877 | 55591.6 |
| hcp1 family type vi secretion system effector | A1395_19375 | Not Available | Positive | 4716996 - 4717484 | 17663.1 |
| type vi secretion system lysozyme | A1395_19380 | Not Available | Positive | 4717656 - 4718171 | 18818.5 |
| type vi secretion system protein impg | A1395_19385 | Not Available | Positive | 4718168 - 4720027 | 69452.9 |
| type vi secretion protein | A1395_19390 | Not Available | Positive | 4719991 - 4721043 | 39623.9 |
| clpv1 family t6ss atpase | A1395_19395 | Not Available | Positive | 4721036 - 4723711 | 97887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







