Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | A1395_16620 | Not Available | Negative | 4088077 - 4088985 | 33678.5 |
| spermidine/putrescine abc transporter atp-binding protein | A1395_16625 | Not Available | Positive | 4089212 - 4090330 | 41097.6 |
| abc transporter permease | A1395_16630 | Not Available | Positive | 4090346 - 4091266 | 33585.3 |
| abc transporter permease | A1395_16635 | Not Available | Positive | 4091263 - 4092072 | 28947.3 |
| spermidine/putrescine abc transporter substrate-binding protein | A1395_16640 | Not Available | Positive | 4092100 - 4093134 | 37969.8 |
| amidase | A1395_16645 | Not Available | Positive | 4093206 - 4094669 | 53199.5 |
| Trna-met | Not Available | Not Available | Positive | 4094747 - 4094823 | Not Available |
| arac family transcriptional regulator | A1395_16655 | Not Available | Negative | 4094980 - 4095915 | 35015.7 |
| phenylacetaldoxime dehydratase | A1395_16660 | Not Available | Positive | 4096471 - 4097529 | 39959.9 |
| phenol degradation protein meta | A1395_16665 | Not Available | Positive | 4097621 - 4098487 | 31757.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







