Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxovalerate aldolase | A1395_11975 | Not Available | Positive | 2698509 - 2699543 | 37202.6 |
| 4-oxalocrotonate decarboxylase | A1395_11980 | Not Available | Positive | 2699540 - 2700331 | 28285.8 |
| 2-aminomuconate deaminase | A1395_11985 | Not Available | Positive | 2700328 - 2700762 | 16089.1 |
| 3-hydroxyanthranilate 3,4-dioxygenase | A1395_11990 | Not Available | Positive | 2700765 - 2701337 | 22302.3 |
| aminocarboxymuconate-semialdehyde decarboxylase | A1395_11995 | Not Available | Positive | 2701334 - 2702323 | 36685.3 |
| 4-hydroxybenzoate transporter | A1395_12000 | Not Available | Positive | 2702426 - 2703778 | 47354.0 |
| porin | A1395_12005 | Not Available | Negative | 2703861 - 2705180 | 48244.2 |
| amino acid permease | A1395_12010 | Not Available | Negative | 2705345 - 2706760 | 50881.4 |
| kynureninase | A1395_12015 | Not Available | Negative | 2706792 - 2708036 | 45465.6 |
| nucleoside-specific channel-forming protein tsx | A1395_12020 | Not Available | Positive | 2708403 - 2709350 | 35253.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







