Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol 2-dehydrogenase | A1395_10355 | Not Available | Negative | 2348097 - 2349107 | 36222.6 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | A1395_10360 | Not Available | Negative | 2349142 - 2351079 | 70110.7 |
| xylose isomerase | A1395_10365 | Not Available | Negative | 2351149 - 2351970 | 29855.9 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | A1395_10370 | Not Available | Negative | 2352007 - 2353506 | 53481.4 |
| 5-deoxy-glucuronate isomerase | A1395_10375 | Not Available | Negative | 2353550 - 2354356 | 29465.7 |
| myo-inosose-2 dehydratase | A1395_10380 | Not Available | Negative | 2354353 - 2355261 | 33307.6 |
| 5-dehydro-2-deoxygluconokinase | A1395_10385 | Not Available | Negative | 2355392 - 2357332 | 71263.3 |
| rpir family transcriptional regulator | A1395_10390 | Not Available | Positive | 2357645 - 2358565 | 34297.9 |
| dhh family protein | A1395_10395 | Not Available | Negative | 2358562 - 2359494 | 34104.8 |
| gntr family transcriptional regulator | A1395_10400 | Not Available | Negative | 2359577 - 2361046 | 53164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







