Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | A1395_04855 | Not Available | Positive | 1054699 - 1055073 | 13288.8 |
| succinate dehydrogenase | A1395_04860 | Not Available | Positive | 1055067 - 1055435 | 13612.8 |
| succinate dehydrogenase flavoprotein subunit | A1395_04865 | Not Available | Positive | 1055439 - 1057211 | 63613.7 |
| succinate dehydrogenase iron-sulfur subunit | A1395_04870 | Not Available | Positive | 1057224 - 1057928 | 26090.7 |
| 2-oxoglutarate dehydrogenase subunit e1 | A1395_04875 | Not Available | Positive | 1058192 - 1061023 | 106716.0 |
| dihydrolipoamide succinyltransferase | A1395_04880 | Not Available | Positive | 1061066 - 1062289 | 42368.2 |
| dihydrolipoyl dehydrogenase | A1395_04885 | Not Available | Positive | 1062393 - 1063829 | 49834.3 |
| succinate--coa ligase subunit beta | A1395_04890 | Not Available | Positive | 1064059 - 1065225 | 41341.9 |
| succinate--coa ligase subunit alpha | A1395_04895 | Not Available | Positive | 1065225 - 1066106 | 29945.4 |
| branched-chain amino acid abc transporter substrate-binding protein | A1395_04900 | Not Available | Positive | 1066571 - 1067884 | 45116.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







