Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | strain 11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Craugastor crassidigitus |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1359144 bp
Thymine Count
1323006 bp
Guanine Count
2159815 bp
Cytosine Count
2211552 bp
Genome Length
7053517 bp
Protein-coding Genes
6002 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | A1395_04410 | Not Available | Positive | 965057 - 965617 | 20783.7 |
| sam-dependent methyltransferase | A1395_04415 | Not Available | Positive | 965614 - 966840 | 45284.2 |
| epimerase | A1395_04420 | Not Available | Positive | 966846 - 967703 | 31433.7 |
| methyltransferase | A1395_04425 | Not Available | Positive | 967693 - 968763 | 39278.8 |
| cephalosporin hydroxylase | A1395_04430 | Not Available | Positive | 968784 - 969521 | 27962.4 |
| glycosyl transferase family 2 | A1395_04435 | Not Available | Positive | 969573 - 972506 | 108480.0 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | A1395_04440 | Not Available | Positive | 972517 - 973518 | 36872.2 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | A1395_04445 | Not Available | Positive | 973515 - 974687 | 43082.2 |
| pseudaminic acid cytidylyltransferase | A1395_04450 | Not Available | Positive | 974684 - 975391 | 26006.1 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | A1395_04455 | Not Available | Positive | 975388 - 976893 | 55435.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







