Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | strain CBF10-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Viridiplantae, Triticum aestivum |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1110653 bp
Thymine Count
1109953 bp
Guanine Count
1949423 bp
Cytosine Count
1950596 bp
Genome Length
6120625 bp
Protein-coding Genes
5202 genes
Non-Coding Genes
189 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AYO28_26320 | P14176 | Positive | 5219835 - 5220539 | 24760.8 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | AYO28_26325 | Not Available | Negative | 5220716 - 5221618 | 34186.9 |
| 4-hydroxyphenylacetate isomerase | AYO28_26330 | Q9RPU5 | Positive | 5221785 - 5222456 | 24248.2 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | AYO28_26335 | Not Available | Positive | 5222456 - 5223229 | 28771.2 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | AYO28_26340 | P42269 | Positive | 5223235 - 5224695 | 52810.4 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | AYO28_26345 | Q05353 | Positive | 5224852 - 5225709 | 31470.6 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | AYO28_26350 | Q05354 | Positive | 5225725 - 5226117 | 14535.4 |
| mfs transporter | AYO28_26355 | Not Available | Positive | 5226166 - 5227470 | 46940.0 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | AYO28_26360 | P42270 | Positive | 5227482 - 5228285 | 29311.2 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | AYO28_26365 | A6THU5 | Positive | 5228299 - 5229102 | 28480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Nosocomial infections | Causes | PMC11585281 |
| Nosocomial infections | Causes | PMC13243026 |






