Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | strain CBF10-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Viridiplantae, Triticum aestivum |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1110653 bp
Thymine Count
1109953 bp
Guanine Count
1949423 bp
Cytosine Count
1950596 bp
Genome Length
6120625 bp
Protein-coding Genes
5202 genes
Non-Coding Genes
189 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | AYO28_12655 | A4XNB9 | Negative | 1650291 - 1651115 | 29199.1 |
| coproporphyrinogen iii oxidase | AYO28_12660 | B0KF35 | Negative | 1651172 - 1652098 | 34832.6 |
| quinone oxidoreductase | AYO28_12665 | Not Available | Positive | 1652253 - 1653230 | 34135.0 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | AYO28_12670 | Q4KKQ6 | Negative | 1653350 - 1653907 | 20300.3 |
| dna processing protein dpra | AYO28_12675 | P43862 | Negative | 1653945 - 1655042 | 38148.2 |
| peptide deformylase | AYO28_12680 | A4VFH8 | Positive | 1655240 - 1655746 | 19278.3 |
| methionyl-trna formyltransferase | AYO28_12685 | Q4KKR0 | Positive | 1655805 - 1656737 | 32883.8 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | AYO28_12690 | Q88RR3 | Positive | 1656734 - 1658044 | 47686.4 |
| potassium transporter peripheral membrane component | AYO28_12695 | E1V6C6 | Positive | 1658065 - 1659438 | 49777.0 |
| hypothetical protein | AYO28_12700 | Q9I7B1 | Positive | 1659450 - 1659764 | 11349.6 |
Pathways
1341 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Nosocomial infections | Causes | PMC11585281 |
| Nosocomial infections | Causes | PMC13243026 |






