Vibrio europaeus strain PP-638 unknown

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio europaeus strain PP-638 is characterized by its single replicon structure, which indicates a relatively simple genomic organization. The strain is cataloged under the accession number LUAX00000000.1, providing a reference point for genomic studies and potential comparative analyses with other Vibrio species. Vibrio europaeus is part of the Vibrio genus, known for its aquatic habitats and association with marine environments. While specific ecological roles or pathogenic potentials of strain PP-638 are not detailed, members of the Vibrio genus are often involved in nutrient cycling in marine ecosystems and can exhibit diverse metabolic capabilities. The presence of a single replicon may suggest streamlined regulation and replication processes, which could influence the strain's adaptability to environmental changes. This trait may also offer advantages in terms of growth and reproduction in oligotrophic marine environments where resource availability can be limited. Overall, the genomic characteristics of Vibrio europaeus strain PP-638, including its single replicon and designated accession, provide a foundation for further research into its ecological roles and potential applications in marine microbiology. Understanding the genetic underpinnings of this strain could lead to insights into its function within marine ecosystems, as well as its interactions with other microorganisms and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio europaeus
Strainstrain PP-638 unknown

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio europaeus strain PP-638 unknown
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio europaeus strain PP-638 unknown, whole genome shotgun

Gene Summary

Adenine Count

1505972 bp

Thymine Count

1504387 bp

Guanine Count

1230462 bp

Cytosine Count

1228617 bp

Genome Length

5469456 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux transporter periplasmic adaptor subunitAZ468_13995Not AvailablePositive3042058 - 304316440560.7
transporterAZ468_14000Not AvailablePositive3043176 - 3046298111643.0
cytoplasmic proteinAZ468_14005Not AvailablePositive3046488 - 30467399601.68
ketol-acid reductoisomeraseAZ468_14010Not AvailableNegative3047411 - 304889554469.9
transcriptional regulator ilvyAZ468_14015Not AvailablePositive3049041 - 304993132796.8
oxygen-independent coproporphyrinogen iii oxidaseAZ468_14020Not AvailableNegative3050193 - 305158153299.8
coproporphyrinogen iii oxidaseAZ468_14025Not AvailableNegative3051766 - 305225418626.9
gtpase-activating proteinAZ468_14030Not AvailableNegative3052264 - 305282721097.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylaseAZ468_14035Not AvailableNegative3052827 - 305346525002.7
cytochrome cAZ468_14040Not AvailableNegative3054192 - 305480922086.6

Displaying genes 2701 – 2710 of 4815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.