Vibrio europaeus strain PP-638 unknown

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio europaeus strain PP-638 is characterized by its single replicon structure, which indicates a relatively simple genomic organization. The strain is cataloged under the accession number LUAX00000000.1, providing a reference point for genomic studies and potential comparative analyses with other Vibrio species. Vibrio europaeus is part of the Vibrio genus, known for its aquatic habitats and association with marine environments. While specific ecological roles or pathogenic potentials of strain PP-638 are not detailed, members of the Vibrio genus are often involved in nutrient cycling in marine ecosystems and can exhibit diverse metabolic capabilities. The presence of a single replicon may suggest streamlined regulation and replication processes, which could influence the strain's adaptability to environmental changes. This trait may also offer advantages in terms of growth and reproduction in oligotrophic marine environments where resource availability can be limited. Overall, the genomic characteristics of Vibrio europaeus strain PP-638, including its single replicon and designated accession, provide a foundation for further research into its ecological roles and potential applications in marine microbiology. Understanding the genetic underpinnings of this strain could lead to insights into its function within marine ecosystems, as well as its interactions with other microorganisms and the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio europaeus
Strainstrain PP-638 unknown

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio europaeus strain PP-638 unknown
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio europaeus strain PP-638 unknown, whole genome shotgun

Gene Summary

Adenine Count

1505972 bp

Thymine Count

1504387 bp

Guanine Count

1230462 bp

Cytosine Count

1228617 bp

Genome Length

5469456 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine repressorAZ468_11055Not AvailableNegative2427375 - 242784517011.6
malate dehydrogenaseAZ468_11060Not AvailablePositive2428179 - 242911132159.7
hypothetical proteinAZ468_11065Not AvailablePositive2429228 - 24294197276.62
reactive intermediate/imine deaminaseAZ468_11070Not AvailableNegative2429482 - 242987113759.4
aspartate carbamoyltransferase regulatory subunitAZ468_11075Not AvailableNegative2430012 - 243047317391.1
aspartate carbamoyltransferaseAZ468_11080Not AvailableNegative2430488 - 243141734381.8
ornithine carbamoyltransferaseAZ468_11085Not AvailableNegative2431669 - 243267337198.7
atpaseAZ468_11090Not AvailableNegative2432793 - 243416951598.7
rna polymerase-associated protein rapaAZ468_11095Not AvailablePositive2434645 - 2437554109294.0
rna pseudouridine synthaseAZ468_11100Not AvailablePositive2437618 - 243835528642.3

Displaying genes 2141 – 2150 of 4815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.