Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. HMSC065F10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
466128 bp
Thymine Count
472661 bp
Guanine Count
591629 bp
Cytosine Count
581946 bp
Genome Length
2112364 bp
Protein-coding Genes
1615 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit d | HMPREF2890_01780 | Not Available | Positive | 456134 - 456778 | 24848.1 |
| hypothetical protein | HMPREF2890_01785 | Not Available | Positive | 456775 - 458631 | 70081.3 |
| atpase | HMPREF2890_01790 | Not Available | Positive | 458681 - 459130 | 15387.4 |
| hypothetical protein | HMPREF2890_01795 | Not Available | Positive | 460093 - 462225 | 81881.1 |
| 4-alpha-glucanotransferase | HMPREF2890_01800 | Not Available | Positive | 462254 - 463516 | 47126.8 |
| alpha-amylase | HMPREF2890_01805 | Not Available | Positive | 463570 - 464904 | 51024.4 |
| branched chain amino acid aminotransferase | HMPREF2890_01810 | Not Available | Positive | 464923 - 465963 | 38268.5 |
| orotidine 5'-phosphate decarboxylase | HMPREF2890_01815 | Not Available | Positive | 466235 - 467065 | 30392.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | HMPREF2890_01820 | Not Available | Positive | 467078 - 468154 | 38545.6 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | HMPREF2890_01825 | Not Available | Positive | 468160 - 469557 | 51034.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


