Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. HMSC065F10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
466128 bp
Thymine Count
472661 bp
Guanine Count
591629 bp
Cytosine Count
581946 bp
Genome Length
2112364 bp
Protein-coding Genes
1615 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | HMPREF2890_01005 | Not Available | Negative | 267955 - 268875 | 34291.7 |
| peptidase s9 | HMPREF2890_01010 | Not Available | Negative | 268875 - 271070 | 83450.7 |
| hypothetical protein | HMPREF2890_01015 | Not Available | Positive | 271377 - 273386 | 75899.1 |
| abc transporter atp-binding protein | HMPREF2890_01020 | Not Available | Positive | 273404 - 274387 | 37716.1 |
| hypothetical protein | HMPREF2890_01025 | Not Available | Positive | 274380 - 275702 | 48989.3 |
| chromosomal replication initiator protein dnaa | HMPREF2890_01030 | Not Available | Positive | 276026 - 277438 | 53828.6 |
| diaminopimelate epimerase | HMPREF2890_01035 | Not Available | Positive | 278442 - 279242 | 29314.0 |
| ll-diaminopimelate aminotransferase | HMPREF2890_01040 | Not Available | Positive | 279249 - 280472 | 45809.2 |
| crossover junction endodeoxyribonuclease ruvc | HMPREF2890_01045 | Not Available | Positive | 280477 - 281061 | 21160.9 |
| hypothetical protein | HMPREF2890_01050 | Not Available | Positive | 281770 - 282624 | 31187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


