Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. HMSC065F10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
466128 bp
Thymine Count
472661 bp
Guanine Count
591629 bp
Cytosine Count
581946 bp
Genome Length
2112364 bp
Protein-coding Genes
1615 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-diphosphatase | HMPREF2890_08085 | Not Available | Positive | 2046018 - 2046872 | 31241.3 |
| trna pseudouridine(55) synthase | HMPREF2890_08090 | Not Available | Positive | 2046882 - 2047721 | 31540.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF2890_08095 | Not Available | Positive | 2047750 - 2048799 | 39817.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | HMPREF2890_08100 | Not Available | Positive | 2048805 - 2049272 | 17587.2 |
| crossover junction endodeoxyribonuclease ruva | HMPREF2890_08105 | Not Available | Positive | 2049257 - 2049700 | 16709.5 |
| peptide deformylase | HMPREF2890_08110 | Not Available | Positive | 2049722 - 2050279 | 20984.2 |
| hypothetical protein | HMPREF2890_08115 | Not Available | Positive | 2050319 - 2052361 | 77122.8 |
| cytidylate kinase | HMPREF2890_08120 | Not Available | Positive | 2052361 - 2053047 | 25698.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HMPREF2890_08125 | Not Available | Positive | 2053044 - 2053913 | 32274.6 |
| threonine--trna ligase | HMPREF2890_08130 | Not Available | Positive | 2054084 - 2056090 | 76979.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


