Porphyromonas sp. HMSC065F10

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas sp. HMSC065F10 is a rod-shaped bacterium that possesses flagella, which may contribute to its motility in various environments. It is characterized by having a single replicon, indicating a streamlined genomic organization that could play a role in its adaptability and efficiency in replication. The genomic data for this organism can be found under the accession number LTXH00000000.1, providing a resource for further studies on its genetic makeup and potential applications in microbiology. As a member of the Porphyromonas genus, this species may be involved in various ecological interactions, particularly in anaerobic environments where it could participate in the degradation of organic matter. The presence of flagella suggests that Porphyromonas sp. HMSC065F10 might have the ability to navigate through its habitat, potentially influencing its role in microbial communities. This motility could enhance its interactions with other microorganisms and contribute to nutrient cycling processes. The knowledge of its traits and genomic data lays the groundwork for future studies on its ecological significance and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas sp. HMSC065F10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas sp. HMSC065F10

Gene Summary

Adenine Count

466128 bp

Thymine Count

472661 bp

Guanine Count

591629 bp

Cytosine Count

581946 bp

Genome Length

2112364 bp

Protein-coding Genes

1615 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF2890_07305Not AvailableNegative1861801 - 186248425943.4
endonucleaseHMPREF2890_07310Not AvailablePositive1863084 - 186394132660.1
Trna-aspNot AvailableNot AvailablePositive1864050 - 1864123Not Available
redox-sensing transcriptional repressor rexHMPREF2890_07320Not AvailablePositive1864466 - 186511623990.0
hypothetical proteinHMPREF2890_07325Not AvailablePositive1865113 - 186572422649.2
hypothetical proteinHMPREF2890_07330Not AvailablePositive1865721 - 186687241573.5
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseHMPREF2890_07335Not AvailablePositive1866875 - 186739018507.0
aspartate 1-decarboxylaseHMPREF2890_07340Not AvailablePositive1867425 - 186777812831.4
arginine--trna ligaseHMPREF2890_07345Not AvailablePositive1867784 - 186958968509.5
cmp deaminaseHMPREF2890_07350Not AvailablePositive1869612 - 187006416575.8

Displaying genes 1451 – 1460 of 1666 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.