Porphyromonas sp. HMSC065F10

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas sp. HMSC065F10 is a rod-shaped bacterium that possesses flagella, which may contribute to its motility in various environments. It is characterized by having a single replicon, indicating a streamlined genomic organization that could play a role in its adaptability and efficiency in replication. The genomic data for this organism can be found under the accession number LTXH00000000.1, providing a resource for further studies on its genetic makeup and potential applications in microbiology. As a member of the Porphyromonas genus, this species may be involved in various ecological interactions, particularly in anaerobic environments where it could participate in the degradation of organic matter. The presence of flagella suggests that Porphyromonas sp. HMSC065F10 might have the ability to navigate through its habitat, potentially influencing its role in microbial communities. This motility could enhance its interactions with other microorganisms and contribute to nutrient cycling processes. The knowledge of its traits and genomic data lays the groundwork for future studies on its ecological significance and potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas sp. HMSC065F10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas sp. HMSC065F10

Gene Summary

Adenine Count

466128 bp

Thymine Count

472661 bp

Guanine Count

591629 bp

Cytosine Count

581946 bp

Genome Length

2112364 bp

Protein-coding Genes

1615 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit cHMPREF2890_06720Not AvailablePositive1705362 - 170718869864.0
d-tyrosyl-trna(tyr) deacylaseHMPREF2890_06725Not AvailablePositive1707595 - 170804416057.5
pyrophosphataseHMPREF2890_06730Not AvailablePositive1708041 - 170840313688.0
2-deoxyribose-5-phosphate aldolaseHMPREF2890_06735Not AvailablePositive1708393 - 170929233307.6
hypothetical proteinHMPREF2890_06740Not AvailablePositive1709678 - 171100048841.4
hypothetical proteinHMPREF2890_06745Not AvailablePositive1711005 - 171302375784.0
uracil-dna glycosylaseHMPREF2890_06750Not AvailableNegative1713487 - 171415825754.8
hypothetical proteinHMPREF2890_06755Not AvailableNegative1714158 - 171677099569.4
hypothetical proteinHMPREF2890_06760Not AvailableNegative1716788 - 171847063803.7
susc/raga family proteinHMPREF2890_06765Not AvailablePositive1718708 - 1721818114730.0

Displaying genes 1341 – 1350 of 1666 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.