Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. HMSC065F10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
466128 bp
Thymine Count
472661 bp
Guanine Count
591629 bp
Cytosine Count
581946 bp
Genome Length
2112364 bp
Protein-coding Genes
1615 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF2890_05435 | Not Available | Negative | 1373316 - 1373894 | 22202.2 |
| dtdp-glucose 4,6-dehydratase | HMPREF2890_05440 | Not Available | Negative | 1373972 - 1375045 | 40910.8 |
| glucose-1-phosphate thymidylyltransferase | HMPREF2890_05445 | Not Available | Negative | 1375042 - 1375923 | 32790.3 |
| phosphohydrolase | HMPREF2890_05450 | Not Available | Negative | 1376079 - 1376588 | 19048.3 |
| hypothetical protein | HMPREF2890_05455 | Not Available | Negative | 1376609 - 1378111 | 54905.6 |
| exopolyphosphatase | HMPREF2890_05460 | Not Available | Negative | 1378117 - 1379010 | 33393.5 |
| rna degradosome polyphosphate kinase | HMPREF2890_05465 | Not Available | Negative | 1379023 - 1381122 | 81613.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HMPREF2890_05470 | Not Available | Positive | 1381874 - 1382395 | 19314.2 |
| sodium:proton antiporter | HMPREF2890_05475 | Not Available | Negative | 1382353 - 1383687 | 46602.5 |
| dna mismatch repair protein muts | HMPREF2890_05480 | Not Available | Negative | 1383894 - 1386500 | 96926.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


