Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylamine dehydrogenase | AX777_00975 | Not Available | Negative | 1024178 - 1025356 | 42572.8 |
| mfs transporter | AX777_00980 | Not Available | Negative | 1025501 - 1026682 | 39302.0 |
| tetr family transcriptional regulator | AX777_00985 | Not Available | Negative | 1026757 - 1027410 | 24249.6 |
| cytochrome c-552 | AX777_00990 | Not Available | Positive | 1027624 - 1028103 | 16431.2 |
| 3-keto-5-aminohexanoate cleavage protein | AX777_00995 | Q88JU3 | Positive | 1028207 - 1030078 | 68189.6 |
| porin | AX777_01000 | Q43923 | Negative | 1030085 - 1031398 | 47039.1 |
| shikimate dehydrogenase | AX777_01005 | A0K2D5 | Negative | 1031395 - 1032291 | 31068.4 |
| mfs transporter | AX777_01010 | Q51955 | Negative | 1032318 - 1033673 | 46954.9 |
| lysr family transcriptional regulator | AX777_01015 | Q00678 | Negative | 1033825 - 1034730 | 33311.5 |
| tonb-dependent receptor | AX777_01020 | Not Available | Negative | 1034889 - 1037582 | 95712.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

