Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalomesaconate tautomerase | AX777_00515 | Q0KJL4 | Negative | 908546 - 909610 | 37119.6 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | AX777_00520 | G2IQQ8 | Negative | 909603 - 910277 | 23595.7 |
| lysr family transcriptional regulator | AX777_00525 | Q88JX7 | Positive | 910382 - 911533 | 40929.2 |
| 6-phosphogluconate dehydrogenase | AX777_00530 | Not Available | Positive | 911598 - 912494 | 30739.1 |
| 4-oxalomesaconate hydratase | AX777_00535 | G2IQQ5 | Positive | 912491 - 913513 | 37661.2 |
| protocatechuate 3,4-dioxygenase | AX777_00540 | P22635 | Positive | 913598 - 914002 | 15304.3 |
| protocatechuate 3,4-dioxygenase | AX777_00545 | P22636 | Positive | 914002 - 914850 | 31269.3 |
| oxidoreductase | AX777_00550 | Q9KWL3 | Positive | 915010 - 915951 | 34440.9 |
| hypothetical protein | AX777_00555 | Not Available | Negative | 916082 - 916309 | 8588.5 |
| hypothetical protein | AX777_00560 | Not Available | Negative | 916299 - 916529 | 8755.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

