Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AX777_00465 | P16931 | Negative | 896912 - 897805 | 32432.5 |
| methylmalonate-semialdehyde dehydrogenase | AX777_00470 | Q9I702 | Positive | 898009 - 899505 | 53340.0 |
| endonuclease | AX777_00475 | Not Available | Negative | 899570 - 899875 | 11641.3 |
| acyl-coa dehydrogenase | AX777_00480 | Q54IM8 | Positive | 899944 - 901086 | 41378.1 |
| enoyl-coa hydratase | AX777_00485 | Q5ZJ60 | Positive | 901092 - 902162 | 38532.2 |
| 3-hydroxyisobutyrate dehydrogenase | AX777_00490 | Q9I5I6 | Positive | 902190 - 903077 | 29464.5 |
| cytochrome | AX777_00495 | O34374 | Positive | 903173 - 904753 | 57031.1 |
| nickel uptake transporter family protein | AX777_00500 | Not Available | Negative | 904792 - 905424 | 22375.9 |
| ferrisiderophore receptor | AX777_00505 | E1W8M5 | Negative | 905436 - 907505 | 75229.9 |
| 2-pyrone-4,6-dicarboxylate hydrolase | AX777_00510 | O87170 | Negative | 907662 - 908549 | 32702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

