Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase | AX777_00115 | Not Available | Negative | 799193 - 801355 | 79382.5 |
| amidohydrolase | AX777_00120 | Not Available | Positive | 801422 - 802699 | 43917.8 |
| amino acid transporter | AX777_00125 | P94408 | Positive | 802696 - 804021 | 47288.8 |
| hypothetical protein | AX777_00130 | Not Available | Positive | 804121 - 806310 | 79566.0 |
| hypothetical protein | AX777_00135 | Not Available | Positive | 806372 - 806686 | 11540.9 |
| hypothetical protein | AX777_00140 | Not Available | Positive | 806793 - 807062 | 9285.66 |
| sagd family bacteriocin biosynthesis docking scaffold | AX777_00145 | P9WF26 | Positive | 807077 - 808255 | 41600.9 |
| transcriptional regulator | AX777_00150 | Not Available | Positive | 808252 - 808944 | 24499.9 |
| trifolitoxin synthesis, tfua | AX777_00155 | Not Available | Negative | 808931 - 810955 | 73964.0 |
| glycogen debranching protein | AX777_00160 | Not Available | Negative | 811073 - 813103 | 76621.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

