Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal resistance protein | AX777_00015 | Not Available | Positive | 769672 - 770106 | 15593.0 |
| rna polymerase subunit sigma-24 | AX777_00020 | Not Available | Positive | 770103 - 770678 | 21035.1 |
| copper-binding protein | AX777_00025 | Not Available | Positive | 770685 - 772424 | 63095.2 |
| copper resistance protein copb | AX777_00030 | Not Available | Positive | 772421 - 773281 | 30950.5 |
| tonb-dependent receptor | AX777_00035 | Q8DD41 | Positive | 773779 - 775767 | 72556.5 |
| peptidase | AX777_00040 | Not Available | Positive | 775770 - 777269 | 55782.2 |
| nickel transporter | AX777_00045 | P23516 | Positive | 777266 - 778318 | 37144.1 |
| nad(p)-dependent oxidoreductase | AX777_00050 | Q8U8I2 | Negative | 778410 - 779156 | 25996.2 |
| rnd transporter | AX777_00055 | Not Available | Negative | 779326 - 780732 | 49470.8 |
| efflux transporter periplasmic adaptor subunit | AX777_00060 | Q44585 | Negative | 780722 - 781927 | 41060.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

