Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copc | AX777_16960 | P12376 | Positive | 719118 - 719495 | 13081.1 |
| copper resistance protein copd | AX777_16965 | Not Available | Positive | 719500 - 720444 | 32540.8 |
| ubiquinone biosynthesis protein | AX777_16970 | Not Available | Positive | 720481 - 721155 | 24455.6 |
| haloacid dehalogenase | AX777_16975 | Q9ZHC7 | Positive | 721263 - 723620 | 82103.0 |
| merr family transcriptional regulator | AX777_16980 | Q9X5X4 | Positive | 723617 - 724015 | 14842.8 |
| hypothetical protein | AX777_16985 | Not Available | Positive | 724009 - 724230 | 7607.47 |
| enoyl-coa hydratase | AX777_16995 | Q9X448 | Positive | 726143 - 727570 | 49636.1 |
| acetate kinase | AX777_17000 | B3QA57 | Positive | 727563 - 728753 | 41896.3 |
| enoyl-acp reductase | AX777_17005 | P58380 | Positive | 728750 - 729523 | 26999.6 |
| hypothetical protein | AX777_17010 | Not Available | Negative | 729551 - 729970 | 14400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

