Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copa | AX777_16860 | Not Available | Positive | 698630 - 700336 | 62243.4 |
| copper resistance protein copb | AX777_16865 | P12375 | Positive | 700516 - 701319 | 29664.8 |
| mfs transporter | AX777_16870 | Not Available | Positive | 701313 - 702554 | 42490.1 |
| metal-binding protein | AX777_16875 | Not Available | Positive | 702623 - 703060 | 15079.5 |
| histidine utilization repressor | AX777_16880 | Q9HU78 | Positive | 703201 - 703941 | 27444.9 |
| hypothetical protein | AX777_16885 | Not Available | Negative | 703945 - 704679 | 27483.3 |
| hypothetical protein | AX777_16890 | Not Available | Negative | 704676 - 705380 | 26650.6 |
| tonb-dependent receptor | AX777_16895 | Not Available | Negative | 705391 - 708093 | 95821.6 |
| tetr family transcriptional regulator | AX777_16900 | Q9ADP7 | Negative | 708832 - 709398 | 20744.0 |
| short-chain dehydrogenase | AX777_16905 | Q5R6U1 | Positive | 709468 - 710298 | 29463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

