Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_08485 | Not Available | Negative | 659552 - 659749 | 6698.37 |
| merr family transcriptional regulator | AX777_16660 | P58379 | Negative | 660982 - 661368 | 13948.6 |
| haloacid dehalogenase | AX777_16665 | Not Available | Negative | 661365 - 663734 | 82834.1 |
| thioredoxin reductase | AX777_16670 | Q928B5 | Negative | 663839 - 664726 | 31077.2 |
| flagellar biosynthetic protein fliq | AX777_16675 | P0AC09 | Positive | 664968 - 665312 | 12136.1 |
| type ii restriction endonuclease | AX777_16680 | Not Available | Positive | 665398 - 666696 | 47849.0 |
| copper resistance protein copd | AX777_16685 | P12377 | Negative | 666704 - 667639 | 32620.1 |
| copper resistance protein copc | AX777_16690 | Not Available | Negative | 667644 - 668024 | 13228.3 |
| cytochrome c | AX777_16695 | Not Available | Positive | 668248 - 668844 | 21846.3 |
| hypothetical protein | AX777_16700 | Not Available | Positive | 668980 - 669261 | 9814.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

