Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | AX777_08335 | P29931 | Positive | 629480 - 629986 | 17449.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AX777_08340 | A9W317 | Negative | 630015 - 630854 | 29622.6 |
| had family hydrolase | AX777_08345 | Not Available | Negative | 630851 - 631522 | 24894.6 |
| lysine decarboxylase | AX777_08350 | Not Available | Negative | 631587 - 632465 | 32903.4 |
| extensin | AX777_08355 | Not Available | Negative | 632613 - 633311 | 24754.6 |
| phosphoserine aminotransferase | AX777_08360 | Q8TNI1 | Positive | 633472 - 634635 | 41326.2 |
| 3-phosphoglycerate dehydrogenase | AX777_08365 | P73821 | Positive | 634755 - 636335 | 55648.3 |
| hypothetical protein | AX777_08370 | P45736 | Positive | 636432 - 636779 | 13009.4 |
| atp phosphoribosyltransferase regulatory subunit | AX777_08375 | B6INM0 | Positive | 636790 - 637914 | 39693.4 |
| esterase | AX777_08380 | Not Available | Negative | 637908 - 638768 | 30246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

