Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s9 | AX777_08285 | O07834 | Positive | 619163 - 621235 | 77202.2 |
| thioesterase | AX777_08290 | Not Available | Positive | 621235 - 621633 | 14954.6 |
| iron abc transporter | AX777_08295 | Not Available | Negative | 621646 - 622506 | 30336.1 |
| tonb-dependent receptor | AX777_08300 | Q57H87 | Positive | 622903 - 624858 | 70229.4 |
| metal-binding protein | AX777_08305 | Not Available | Positive | 624858 - 625265 | 14776.5 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | AX777_08310 | Q2GBJ7 | Positive | 625262 - 626275 | 34182.1 |
| histidine phosphatase family protein | AX777_08315 | Not Available | Positive | 626272 - 626841 | 20361.5 |
| cobalamin synthase | AX777_08320 | Q2GBJ9 | Positive | 626838 - 627557 | 25288.3 |
| threonine-phosphate decarboxylase | AX777_08325 | P21633 | Positive | 627554 - 628537 | 35314.5 |
| adenosylcobinamide-phosphate synthase | AX777_08330 | P0CY56 | Positive | 628530 - 629483 | 34143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

