Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | AX777_08185 | P00087 | Positive | 596668 - 597036 | 12452.3 |
| ap endonuclease | AX777_08190 | Not Available | Positive | 597033 - 598097 | 39543.6 |
| mfs transporter | AX777_08195 | Not Available | Positive | 598166 - 599458 | 45519.5 |
| xylose isomerase | AX777_08200 | Not Available | Positive | 599455 - 600369 | 32881.2 |
| hypothetical protein | AX777_08205 | Not Available | Positive | 600388 - 601239 | 30799.3 |
| transcriptional initiation protein tat | AX777_08210 | Not Available | Positive | 601236 - 601799 | 20241.3 |
| xylose isomerase | AX777_08215 | Not Available | Positive | 601796 - 602644 | 30603.8 |
| gmc family oxidoreductase | AX777_08220 | M1VMF7 | Positive | 602688 - 604370 | 62281.9 |
| laci family transcriptional regulator | AX777_08225 | P72396 | Positive | 604444 - 605478 | 35960.2 |
| stress responsive alpha-beta barrel domain-containing protein | AX777_08230 | Not Available | Positive | 605564 - 605956 | 14484.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

