Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | AX777_08135 | Q9HX48 | Negative | 583578 - 584144 | 21315.8 |
| cupin | AX777_08140 | P27431 | Negative | 584132 - 585301 | 42706.8 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | AX777_08145 | B9JFZ4 | Positive | 585419 - 585958 | 18858.7 |
| potassium transporter | AX777_08150 | P72973 | Positive | 586084 - 587385 | 44752.8 |
| tryptophan halogenase | AX777_08155 | Q8KHZ8 | Positive | 587433 - 588944 | 56669.6 |
| tonb-dependent receptor | AX777_08160 | Not Available | Positive | 589155 - 592265 | 111758.0 |
| peptide abc transporter permease | AX777_08165 | Not Available | Positive | 592415 - 593125 | 25609.5 |
| cupin | AX777_08170 | Not Available | Positive | 593122 - 594135 | 37068.2 |
| alpha-n-arabinofuranosidase | AX777_08175 | Not Available | Positive | 594213 - 595358 | 42171.5 |
| oxidoreductase | AX777_08180 | P55480 | Negative | 595404 - 596540 | 40284.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

