Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | AX777_08085 | Not Available | Positive | 570363 - 571679 | 48130.3 |
| fumarylacetoacetase | AX777_08090 | P16930 | Positive | 571676 - 572968 | 46189.8 |
| maleylacetoacetate isomerase | AX777_08095 | P57109 | Positive | 572965 - 573609 | 23108.5 |
| 2fe-2s ferredoxin | AX777_08100 | Not Available | Positive | 573606 - 573983 | 13497.0 |
| cobalamin biosynthesis protein cobw | AX777_08105 | P29937 | Positive | 574433 - 575485 | 36992.0 |
| cobalamin biosynthesis protein cobn | AX777_08110 | P29929 | Positive | 575485 - 579204 | 132573.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | AX777_08115 | P29930 | Positive | 579207 - 579812 | 22255.1 |
| 5,6-dimethylbenzimidazole synthase | AX777_08120 | Q2RNG5 | Positive | 579812 - 580447 | 23188.8 |
| metal abc transporter permease | AX777_08125 | Q2G506 | Negative | 580452 - 582296 | 67246.7 |
| hypothetical protein | AX777_08130 | Not Available | Positive | 582568 - 582906 | 12353.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

